Table 3

Allelic diversity parameters observed for the six target genes used for MLST analysis of leptospires

Gene
G+C%
No. of alleles
Polymorphic sites
Synonymous sites
Non-synonymous sites
% of variable nucleotide sites
dN/dSratio

adk
41.55
40
117
100
329
27.2
0.039
icd1
40.9
51
127
126
429
22.8
0.017
LipL32
46.46
36
54
112
362
11.3
0.091
LipL41
42.88
52
109
123
393
21.04
0.055
rrs2
51.92
29
20
112
338
4.42
1.369
secY
39.16
49
158
126
423
28.7
0.019

Ahmed et al. Annals of Clinical Microbiology and Antimicrobials 2006 5:28   doi:10.1186/1476-0711-5-28

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